Install pip and numpy on a Linux-based Analyze instance
#######################################################

## Note the instructions assume you have SSH access to the machine 
## e.g. using the ec2-user on an AWS instance.


## Switch from the ec2-user to the lavastorm user:
#sudo su - lavastorm

## Change to the Analyze install directory
#cd /home/lavastorm/Analyze

#### THIS IS AN IMPORTANT STEP THAT SHOULD BE TAKEN EACH TIME YOU LOG INTO THE MACHINE ####
## Configure the profile for the session - sets up the required environment - e.g. paths, etc
#source .profile.lavastorm

## Change to the directory where the shipped Python install is located
#cd platform/linux-x86-64/python/bin/

## Confirm the environment is picking up the correct Python instance
#which python

## the output from the above should be: ~/Analyze/platform/linux-x86-64/python/bin/python

## And confirm the Python version is correct too
#./python2.7 -V

## the output should be: Python 2.7.15

## Check whether Pip is installed already
#./python -m pip --version

## If it is not installed you should get an error:  No module named pip

## If it is not installed, download the boostrap installer 
#sudo curl -O https://bootstrap.pypa.io/get-pip.py

## Now install pip if it wasn't installed
#./python get-pip.py

## Check the system now reports it is correctly installed
#./python -m pip --version

## It should be installed in the user's local site-packages directory:
## pip 19.3.1 from /home/lavastorm/Analyze/platform/linux-x86-64/python/lib/python2.7/site-packages/pip (python 2.7)

## Install the numpy package for the user
#./python -m pip install --user numpy